BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB025D03SP1|AL428368
(892 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1542 1707 0.0
>3x_Contig1542
Length = 13810
Score = 1707 bits (860), Expect = 0.0
Identities = 888/895 (99%), Gaps = 3/895 (0%)
Strand = Plus / Minus
Query: 1 gatccctttgaagactttgataatgaggtaaatttaattgatttaacggatgccgaaact 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11524 gatccctttgaagactttgataatgaggtaaatttaattgatttaacggatgccgaaact 11465
Query: 61 gtcccctatgatccttctcctcttccgacgttcagtatatcttctgatccaaaacaggaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11464 gtcccctatgatccttctcctcttccgacgttcagtatatcttctgatccaaaacaggaa 11405
Query: 121 ccatacacggattatttgaacatcagtgaagaagacatgaccagactgaaaacattggat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11404 ccatacacggattatttgaacatcagtgaagaagacatgaccagactgaaaacattggat 11345
Query: 181 aaattgaatggtacagcagatgcattttcattactaagcgtggatactgctgaggcacag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11344 aaattgaatggtacagcagatgcattttcattactaagcgtggatactgctgaggcacag 11285
Query: 241 cgtccttctcccagaagaccttctcctcctccagtaccgcctcagaggaaacccagtgcg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11284 cgtccttctcccagaagaccttctcctcctccagtaccgcctcagaggaaacccagtgcg 11225
Query: 301 aaacagaaaactacaacttcagacacta-acgttgacgcagcattaaaatcctctccacc 359
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 11224 aaacagaaaactacaacttcagacactacacgttgacgcagcattaaaatcctctccacc 11165
Query: 360 tacacaacccaagcagcaaaggcctgttcaaaggcgaaatacgtctatcagcgcasgtnc 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |
Sbjct: 11164 tacacaacccaagcagcaaaggcctgttcaaaggcgaaatacgtctatcagcgcacgttc 11105
Query: 420 gctgcatcgcaaccacagcttaaagcaaaagctgtcaagcgagcctgtcgtcactgccaa 479
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 11104 gctgcatcgcaaccacagcttaaagcaaaagctgtcaagcgaccctgtcgtcactgccaa 11045
Query: 480 aaaatcaattcagaacggcaattcaacaagtaaactcaagaaaccaatttcaaaatctag 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11044 aaaatcaattcagaacggcaattcaacaagtaaactcaagaaaccaatttcaaaatctag 10985
Query: 540 tccctcattaataaatactgtggttagaacaacttctcaaaccaaaactagggtaaatcc 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10984 tccctcattaataaatactgtggttagaacaacttctcaaaccaaaactagggtaaatcc 10925
Query: 600 aacatctgttgcagctactacaaaaacatctgctatatcaactaatcctacaataacgaa 659
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10924 aacatctgttgcagctactacaaaaacatctgctatatcaactaatcctacaataacgaa 10865
Query: 660 accagccccacaaagtttggatgaagttacacagacgaaggaacaactagaggacgagct 719
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10864 accagccccacaaagtttggatgaagttacacagacgaaggaacaactagaggacgagct 10805
Query: 720 tattgaatcattgcctggtgttgataagactgctgctaaacaaatttttagtgaaattgt 779
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10804 tattgaatcattgcctggtgttgataagactgctgctaaacaaatttttagtgaaattgt 10745
Query: 780 cgtccacggagacg-artgtact-gggacgacattgccggtttggaaaccgcaaagaact 837
|||||||||||||| | |||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 10744 cgtccacggagacgaagtgtactggggacgacattgccggtttggaaaccgcaaagaact 10685
Query: 838 ctttgaaagaggcagttgtatatccgttcctaagacctgacctatttcgtgggtt 892
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10684 ctttgaaagaggcagttgtatatccgttcctaagacctgacctatttcgtgggtt 10630
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6372
Number of Sequences: 1807
Number of extensions: 6372
Number of successful extensions: 40
Number of sequences better than 1.0e-20: 1
length of query: 892
length of database: 10,358,551
effective HSP length: 16
effective length of query: 876
effective length of database: 10,329,639
effective search space: 9048763764
effective search space used: 9048763764
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)